Rename all isolate_dependency_* to files.

mojo/mojo_apps.gypi

 # Copyright 2014 The Chromium Authors. All rights reserved.
 # Use of this source code is governed by a BSD-style license that can be
 # found in the LICENSE file.
 
 {
   'targets': [
     {
       # GN version: //mojo/apps/js
       #             //mojo/apps/js/bindings
       #             //mojo/apps/js/bindings/gl
@@ skipping 92 matching lines @@
     ['test_isolation_mode != "noop"', {
       'targets': [
         {
           'target_name': 'mojo_apps_js_unittests_run',
           'type': 'none',
           'dependencies': [
             'mojo_apps_js_unittests',
           ],
           'includes': [
             '../build/isolate.gypi',
-            'mojo_apps_js_unittests.isolate',
           ],
           'sources': [
             'mojo_apps_js_unittests.isolate',
           ],
         },
       ],
     }],
   ],
 }