Revert of Make mojo/services pass in "gn check"

mojo/application/BUILD.gn

 # Copyright 2014 The Chromium Authors. All rights reserved.
 # Use of this source code is governed by a BSD-style license that can be
 # found in the LICENSE file.
 
 # GYP version: mojo/mojo_base.gyp:mojo_application_chromium
 source_set("application") {
   sources = [
     "application_runner_chromium.cc",
     "application_runner_chromium.h",
   ]
 
-  public_deps = [
+  deps = [
+    "//mojo/common",
+    "//mojo/environment:chromium",
     "//mojo/public/cpp/application",
   ]
-  deps = [
-    "//base",
-    "//mojo/common",
-    "//mojo/environment:chromium",
-  ]
 }