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1 <!DOCTYPE html> | |
2 <!-- | |
3 Copyright (c) 2014 The Chromium Authors. All rights reserved. | |
4 Use of this source code is governed by a BSD-style license that can be | |
5 found in the LICENSE file. | |
6 --> | |
7 <link rel="import" href="/tracing/base/statistics.html"> | |
8 <script> | |
9 'use strict'; | |
10 | |
11 // TODO(charliea): Remove: | |
12 /* eslint-disable catapult-camelcase */ | |
13 | |
14 tr.b.unittest.testSuite(function() { | |
15 var Statistics = tr.b.Statistics; | |
16 | |
17 /** | |
18 * Lloyd relaxation in 1D. | |
19 * | |
20 * Keeps the position of the first and last sample. | |
21 **/ | |
22 function relax(samples, opt_iterations) { | |
23 opt_iterations = opt_iterations || 10; | |
24 for (var i = 0; i < opt_iterations; i++) { | |
25 var voronoiBoundaries = []; | |
26 for (var j = 1; j < samples.length; j++) | |
27 voronoiBoundaries.push((samples[j] + samples[j - 1]) * 0.5); | |
28 | |
29 var relaxedSamples = []; | |
30 relaxedSamples.push(samples[0]); | |
31 for (var j = 1; j < samples.length - 1; j++) { | |
32 relaxedSamples.push( | |
33 (voronoiBoundaries[j - 1] + voronoiBoundaries[j]) * 0.5); | |
34 } | |
35 relaxedSamples.push(samples[samples.length - 1]); | |
36 samples = relaxedSamples; | |
37 } | |
38 return samples; | |
39 } | |
40 | |
41 function createRandomSamples(numSamples) { | |
42 var samples = []; | |
43 var position = 0.0; | |
44 samples.push(position); | |
45 for (var i = 1; i < numSamples; i++) { | |
46 position += Math.random(); | |
47 samples.push(position); | |
48 } | |
49 return samples; | |
50 } | |
51 | |
52 test('normalDistribution', function() { | |
53 for (var mean = -100; mean <= 100; mean += 25) { | |
54 for (var stddev = 0.1; stddev < 2; stddev += 0.2) { | |
55 var dist = new Statistics.NormalDistribution(mean, stddev * stddev); | |
56 assert.closeTo(mean, dist.mean, 1e-6); | |
57 assert.closeTo(stddev, dist.standardDeviation, 1e-6); | |
58 assert.closeTo(0, dist.standardDeviation * dist.computeDensity( | |
59 -1e10), 1e-5); | |
60 assert.closeTo(0.05399, dist.standardDeviation * dist.computeDensity( | |
61 dist.mean - 2 * dist.standardDeviation), 1e-5); | |
62 assert.closeTo(0.24197, dist.standardDeviation * dist.computeDensity( | |
63 dist.mean - dist.standardDeviation), 1e-5); | |
64 assert.closeTo(0.39894, dist.standardDeviation * dist.computeDensity( | |
65 dist.mean), 1e-5); | |
66 assert.closeTo(0.24197, dist.standardDeviation * dist.computeDensity( | |
67 dist.mean + dist.standardDeviation), 1e-5); | |
68 assert.closeTo(0.054, dist.standardDeviation * dist.computeDensity( | |
69 dist.mean + 2 * dist.standardDeviation), 1e-5); | |
70 assert.closeTo(0, dist.standardDeviation * dist.computeDensity( | |
71 1e10), 1e-5); | |
72 | |
73 assert.closeTo(0, dist.computePercentile(-1e10), 1e-5); | |
74 assert.closeTo(0.02275, dist.computePercentile( | |
75 dist.mean - 2 * dist.standardDeviation), 1e-5); | |
76 assert.closeTo(0.15866, dist.computePercentile( | |
77 dist.mean - dist.standardDeviation), 1e-5); | |
78 assert.closeTo(0.5, dist.computePercentile(dist.mean), 1e-5); | |
79 assert.closeTo(0.841344, dist.computePercentile( | |
80 dist.mean + dist.standardDeviation), 1e-5); | |
81 assert.closeTo(0.97725, dist.computePercentile( | |
82 dist.mean + 2 * dist.standardDeviation), 1e-5); | |
83 assert.closeTo(1, dist.computePercentile(1e10), 1e-5); | |
84 } | |
85 } | |
86 }); | |
87 | |
88 test('logNormalDistribution', function() { | |
89 // Unlike the Normal distribution, the LogNormal distribution can look very | |
90 // different depending on its parameters, and it's defined in terms of the | |
91 // Normal distribution anyway, so only test the standard LogNormal | |
92 // distribution. | |
93 var dist = new Statistics.LogNormalDistribution(0, 1); | |
94 assert.closeTo(0.3678, dist.mode, 1e-4); | |
95 assert.closeTo(1, dist.median, 1e-6); | |
96 assert.closeTo(1.6487, dist.mean, 1e-4); | |
97 assert.closeTo(0.65774, dist.computeDensity(dist.mode), 1e-5); | |
98 assert.closeTo(0.39894, dist.computeDensity(dist.median), 1e-5); | |
99 assert.closeTo(0.21354, dist.computeDensity(dist.mean), 1e-5); | |
100 assert.closeTo(0, dist.computePercentile(1e-10), 1e-6); | |
101 assert.closeTo(0.15865, dist.computePercentile(dist.mode), 1e-5); | |
102 assert.closeTo(0.5, dist.computePercentile(dist.median), 1e-6); | |
103 assert.closeTo(0.69146, dist.computePercentile(dist.mean), 1e-5); | |
104 assert.closeTo(1, dist.computePercentile(1e100), 1e-5); | |
105 }); | |
106 | |
107 test('divideIfPossibleOrZero', function() { | |
108 assert.equal(Statistics.divideIfPossibleOrZero(1, 2), 0.5); | |
109 assert.equal(Statistics.divideIfPossibleOrZero(0, 2), 0); | |
110 assert.equal(Statistics.divideIfPossibleOrZero(1, 0), 0); | |
111 assert.equal(Statistics.divideIfPossibleOrZero(0, 0), 0); | |
112 }); | |
113 | |
114 test('sumBasic', function() { | |
115 assert.equal(Statistics.sum([1, 2, 3]), 6); | |
116 }); | |
117 | |
118 test('sumWithFunctor', function() { | |
119 var ctx = {}; | |
120 var ary = [1, 2, 3]; | |
121 assert.equal(12, Statistics.sum(ary, function(x, i) { | |
122 assert.equal(this, ctx); | |
123 assert.equal(ary[i], x); | |
124 return x * 2; | |
125 }, ctx)); | |
126 }); | |
127 | |
128 test('minMaxWithFunctor', function() { | |
129 var ctx = {}; | |
130 var ary = [1, 2, 3]; | |
131 function func(x, i) { | |
132 assert.equal(this, ctx); | |
133 assert.equal(ary[i], x); | |
134 return x; | |
135 } | |
136 assert.equal(Statistics.max(ary, func, ctx), 3); | |
137 assert.equal(Statistics.min(ary, func, ctx), 1); | |
138 | |
139 var range = Statistics.range(ary, func, ctx); | |
140 assert.isFalse(range.isEmpty); | |
141 assert.equal(range.min, 1); | |
142 assert.equal(range.max, 3); | |
143 }); | |
144 | |
145 test('maxExtrema', function() { | |
146 assert.equal(Statistics.max([]), -Infinity); | |
147 assert.equal(Statistics.min([]), Infinity); | |
148 }); | |
149 | |
150 test('meanBasic', function() { | |
151 assert.closeTo(Statistics.mean([1, 2, 3]), 2, 1e-6); | |
152 assert.closeTo(Statistics.mean(new Set([1, 2, 3])), 2, 1e-6); | |
153 }); | |
154 | |
155 test('geometricMean', function() { | |
156 assert.strictEqual(1, Statistics.geometricMean([])); | |
157 assert.strictEqual(1, Statistics.geometricMean([1])); | |
158 assert.strictEqual(0, Statistics.geometricMean([-1])); | |
159 assert.strictEqual(0, Statistics.geometricMean([0])); | |
160 assert.strictEqual(0, Statistics.geometricMean([1, 2, 3, 0])); | |
161 assert.strictEqual(0, Statistics.geometricMean([1, 2, 3, -1])); | |
162 assert.strictEqual(1, Statistics.geometricMean([1, 1, 1])); | |
163 assert.strictEqual(2, Statistics.geometricMean([2])); | |
164 assert.closeTo(Math.sqrt(6), Statistics.geometricMean([2, 3]), 1e-6); | |
165 assert.closeTo(6, Statistics.geometricMean(new Set([4, 9])), 1e-6); | |
166 | |
167 var samples = []; | |
168 for (var i = 0; i < 1e3; ++i) | |
169 samples.push(Number.MAX_SAFE_INTEGER); | |
170 assert.closeTo(Number.MAX_SAFE_INTEGER, Statistics.geometricMean(samples), | |
171 Number.MAX_SAFE_INTEGER * 1e-13); | |
172 | |
173 samples = []; | |
174 for (var i = 0; i < 1e3; ++i) | |
175 samples.push(Number.MAX_VALUE / 1e3); | |
176 assert.closeTo(Number.MAX_VALUE / 1e3, Statistics.geometricMean(samples), | |
177 Number.MAX_VALUE * 1e-13); | |
178 }); | |
179 | |
180 test('weightedMean', function() { | |
181 function getWeight(element) { | |
182 return element.weight; | |
183 } | |
184 function getValue(element) { | |
185 return element.value; | |
186 } | |
187 | |
188 var data = [ | |
189 {value: 10, weight: 3}, | |
190 {value: 20, weight: 1}, | |
191 {value: 30, weight: 6} | |
192 ]; | |
193 assert.equal(23, Statistics.weightedMean(data, getWeight, getValue)); | |
194 | |
195 data = [ | |
196 {value: 10, weight: 0}, | |
197 {value: 20, weight: 0}, | |
198 {value: 30, weight: 0} | |
199 ]; | |
200 assert.equal(undefined, Statistics.weightedMean(data, getWeight, getValue)); | |
201 | |
202 data = [ | |
203 {value: 10, weight: -10}, | |
204 {value: 20, weight: 5}, | |
205 {value: 30, weight: 5} | |
206 ]; | |
207 assert.equal(undefined, Statistics.weightedMean(data, getWeight, getValue)); | |
208 }); | |
209 | |
210 test('weightedMean_positionDependent', function() { | |
211 function getWeight(element, idx) { | |
212 return idx; | |
213 } | |
214 // 3 has weight of 0, 6 has weight of 1, 9 has weight of 2 | |
215 assert.equal(8, Statistics.weightedMean([3, 6, 9], getWeight)); | |
216 }); | |
217 | |
218 test('max_positionDependent', function() { | |
219 function getValue(element, idx) { | |
220 return element * idx; | |
221 } | |
222 assert.equal(6, Statistics.max([1, 2, 3], getValue)); | |
223 }); | |
224 | |
225 test('min_positionDependent', function() { | |
226 function getValue(element, idx) { | |
227 return element * idx; | |
228 } | |
229 assert.equal(-6, Statistics.min([1, 2, -3], getValue)); | |
230 }); | |
231 | |
232 test('varianceBasic', function() { | |
233 // In [2, 4, 4, 2], all items have a deviation of 1.0 from the mean so the | |
234 // population variance is 4.0 / 4 = 1.0, but the sample variance is 4.0 / 3. | |
235 assert.equal(Statistics.variance([2, 4, 4, 2]), 4.0 / 3); | |
236 | |
237 // In [1, 2, 3], the squared deviations are 1.0, 0.0 and 1.0 respectively; | |
238 // population variance 2.0 / 3 but sample variance is 2.0 / 2 = 1.0. | |
239 assert.equal(Statistics.variance([1, 2, 3]), 1.0); | |
240 }); | |
241 | |
242 test('varianceWithFunctor', function() { | |
243 var ctx = {}; | |
244 var ary = [{x: 2}, | |
245 {x: 4}, | |
246 {x: 4}, | |
247 {x: 2}]; | |
248 assert.equal(4.0 / 3, Statistics.variance(ary, function(d) { | |
249 assert.equal(ctx, this); | |
250 return d.x; | |
251 }, ctx)); | |
252 }); | |
253 | |
254 test('stddevBasic', function() { | |
255 assert.equal(Statistics.stddev([2, 4, 4, 2]), Math.sqrt(4.0 / 3)); | |
256 }); | |
257 | |
258 test('stddevWithFunctor', function() { | |
259 var ctx = {}; | |
260 var ary = [{x: 2}, | |
261 {x: 4}, | |
262 {x: 4}, | |
263 {x: 2}]; | |
264 assert.equal(Math.sqrt(4.0 / 3), Statistics.stddev(ary, function(d) { | |
265 assert.equal(ctx, this); | |
266 return d.x; | |
267 }, ctx)); | |
268 }); | |
269 | |
270 test('percentile', function() { | |
271 var ctx = {}; | |
272 var ary = [{x: 0}, | |
273 {x: 1}, | |
274 {x: 2}, | |
275 {x: 3}, | |
276 {x: 4}, | |
277 {x: 5}, | |
278 {x: 6}, | |
279 {x: 7}, | |
280 {x: 8}, | |
281 {x: 9}]; | |
282 function func(d, i) { | |
283 assert.equal(ctx, this); | |
284 return d.x; | |
285 } | |
286 assert.equal(Statistics.percentile(ary, 0, func, ctx), 0); | |
287 assert.equal(Statistics.percentile(ary, .5, func, ctx), 4); | |
288 assert.equal(Statistics.percentile(ary, .75, func, ctx), 6); | |
289 assert.equal(Statistics.percentile(ary, 1, func, ctx), 9); | |
290 }); | |
291 | |
292 test('percentile_positionDependent', function() { | |
293 var ctx = {}; | |
294 var ary = [{x: 0}, | |
295 {x: 1}, | |
296 {x: 2}, | |
297 {x: 3}, | |
298 {x: 4}, | |
299 {x: 5}, | |
300 {x: 6}, | |
301 {x: 7}, | |
302 {x: 8}, | |
303 {x: 9}]; | |
304 function func(d, i) { | |
305 assert.equal(ctx, this); | |
306 assert.equal(d.x, i); | |
307 return d.x * i; | |
308 } | |
309 assert.equal(Statistics.percentile(ary, 0, func, ctx), 0); | |
310 assert.equal(Statistics.percentile(ary, .5, func, ctx), 16); | |
311 assert.equal(Statistics.percentile(ary, .75, func, ctx), 36); | |
312 assert.equal(Statistics.percentile(ary, 1, func, ctx), 81); | |
313 }); | |
314 | |
315 test('normalizeSamples', function() { | |
316 var samples = []; | |
317 var results = Statistics.normalizeSamples(samples); | |
318 assert.deepEqual(results.normalized_samples, []); | |
319 assert.deepEqual(results.scale, 1.0); | |
320 | |
321 samples = [0.0, 0.0]; | |
322 results = Statistics.normalizeSamples(samples); | |
323 assert.deepEqual(results.normalized_samples, [0.5, 0.5]); | |
324 assert.deepEqual(results.scale, 1.0); | |
325 | |
326 samples = [0.0, 1.0 / 3.0, 2.0 / 3.0, 1.0]; | |
327 results = Statistics.normalizeSamples(samples); | |
328 assert.deepEqual(results.normalized_samples, | |
329 [1.0 / 8.0, 3.0 / 8.0, 5.0 / 8.0, 7.0 / 8.0]); | |
330 assert.deepEqual(results.scale, 0.75); | |
331 | |
332 samples = [1.0 / 8.0, 3.0 / 8.0, 5.0 / 8.0, 7.0 / 8.0]; | |
333 results = Statistics.normalizeSamples(samples); | |
334 assert.deepEqual(results.normalized_samples, samples); | |
335 assert.deepEqual(results.scale, 1.0); | |
336 }); | |
337 | |
338 /** | |
339 *Tests NormalizeSamples and Discrepancy with random samples. | |
340 * | |
341 * Generates 10 sets of 10 random samples, computes the discrepancy, | |
342 * relaxes the samples using Llloyd's algorithm in 1D, and computes the | |
343 * discrepancy of the relaxed samples. Discrepancy of the relaxed samples | |
344 * must be less than or equal to the discrepancy of the original samples. | |
345 **/ | |
346 test('discrepancy_Random', function() { | |
347 for (var i = 0; i < 10; i++) { | |
348 var samples = createRandomSamples(10); | |
349 var samples = Statistics.normalizeSamples(samples).normalized_samples; | |
350 var d = Statistics.discrepancy(samples); | |
351 var relaxedSamples = relax(samples); | |
352 var dRelaxed = Statistics.discrepancy(relaxedSamples); | |
353 assert.isBelow(dRelaxed, d); | |
354 } | |
355 }); | |
356 | |
357 | |
358 /* Computes discrepancy for sample sets with known statistics. */ | |
359 test('discrepancy_Analytic', function() { | |
360 var samples = []; | |
361 var d = Statistics.discrepancy(samples); | |
362 assert.equal(d, 0.0); | |
363 | |
364 samples = [0.5]; | |
365 d = Statistics.discrepancy(samples); | |
366 assert.equal(d, 0.5); | |
367 | |
368 samples = [0.0, 1.0]; | |
369 d = Statistics.discrepancy(samples); | |
370 assert.equal(d, 1.0); | |
371 | |
372 samples = [0.5, 0.5, 0.5]; | |
373 d = Statistics.discrepancy(samples); | |
374 assert.equal(d, 1.0); | |
375 | |
376 samples = [1.0 / 8.0, 3.0 / 8.0, 5.0 / 8.0, 7.0 / 8.0]; | |
377 d = Statistics.discrepancy(samples); | |
378 assert.equal(d, 0.25); | |
379 | |
380 samples = [1.0 / 8.0, 5.0 / 8.0, 5.0 / 8.0, 7.0 / 8.0]; | |
381 d = Statistics.discrepancy(samples); | |
382 assert.equal(d, 0.5); | |
383 | |
384 samples = [1.0 / 8.0, 3.0 / 8.0, 5.0 / 8.0, 5.0 / 8.0, 7.0 / 8.0]; | |
385 d = Statistics.discrepancy(samples); | |
386 assert.equal(d, 0.4); | |
387 | |
388 samples = [0.0, 1.0 / 3.0, 2.0 / 3.0, 1.0]; | |
389 d = Statistics.discrepancy(samples); | |
390 assert.equal(d, 0.5); | |
391 | |
392 samples = Statistics.normalizeSamples(samples).normalized_samples; | |
393 d = Statistics.discrepancy(samples); | |
394 assert.equal(d, 0.25); | |
395 }); | |
396 | |
397 test('timestampsDiscrepancy', function() { | |
398 var timestamps = []; | |
399 var dAbs = Statistics.timestampsDiscrepancy(timestamps, true); | |
400 assert.equal(dAbs, 0.0); | |
401 | |
402 timestamps = [4]; | |
403 dAbs = Statistics.timestampsDiscrepancy(timestamps, true); | |
404 assert.equal(dAbs, 0.5); | |
405 | |
406 var timestampsA = [0, 1, 2, 3, 5, 6]; | |
407 var timestampsB = [0, 1, 2, 3, 5, 7]; | |
408 var timestampsC = [0, 2, 3, 4]; | |
409 var timestampsD = [0, 2, 3, 4, 5]; | |
410 | |
411 | |
412 var dAbsA = Statistics.timestampsDiscrepancy(timestampsA, true); | |
413 var dAbsB = Statistics.timestampsDiscrepancy(timestampsB, true); | |
414 var dAbsC = Statistics.timestampsDiscrepancy(timestampsC, true); | |
415 var dAbsD = Statistics.timestampsDiscrepancy(timestampsD, true); | |
416 var dRelA = Statistics.timestampsDiscrepancy(timestampsA, false); | |
417 var dRelB = Statistics.timestampsDiscrepancy(timestampsB, false); | |
418 var dRelC = Statistics.timestampsDiscrepancy(timestampsC, false); | |
419 var dRelD = Statistics.timestampsDiscrepancy(timestampsD, false); | |
420 | |
421 | |
422 assert.isBelow(dAbsA, dAbsB); | |
423 assert.isBelow(dRelA, dRelB); | |
424 assert.isBelow(dRelD, dRelC); | |
425 assert.closeTo(dAbsD, dAbsC, 0.0001); | |
426 }); | |
427 | |
428 test('discrepancyMultipleRanges', function() { | |
429 var samples = [[0.0, 1.2, 2.3, 3.3], [6.3, 7.5, 8.4], [4.2, 5.4, 5.9]]; | |
430 var d0 = Statistics.timestampsDiscrepancy(samples[0]); | |
431 var d1 = Statistics.timestampsDiscrepancy(samples[1]); | |
432 var d2 = Statistics.timestampsDiscrepancy(samples[2]); | |
433 var d = Statistics.timestampsDiscrepancy(samples); | |
434 assert.equal(d, Math.max(d0, d1, d2)); | |
435 }); | |
436 | |
437 /** | |
438 * Tests approimate discrepancy implementation by comparing to exact | |
439 * solution. | |
440 **/ | |
441 test('approximateDiscrepancy', function() { | |
442 for (var i = 0; i < 5; i++) { | |
443 var samples = createRandomSamples(10); | |
444 samples = Statistics.normalizeSamples(samples).normalized_samples; | |
445 var d = Statistics.discrepancy(samples); | |
446 var dApprox = Statistics.discrepancy(samples, 500); | |
447 assert.closeTo(d, dApprox, 0.01); | |
448 } | |
449 }); | |
450 | |
451 test('durationsDiscrepancy', function() { | |
452 var durations = []; | |
453 var d = Statistics.durationsDiscrepancy(durations); | |
454 assert.equal(d, 0.0); | |
455 | |
456 durations = [4]; | |
457 d = Statistics.durationsDiscrepancy(durations); | |
458 assert.equal(d, 4.0); | |
459 | |
460 var durationsA = [1, 1, 1, 1, 1]; | |
461 var durationsB = [1, 1, 2, 1, 1]; | |
462 var durationsC = [1, 2, 1, 2, 1]; | |
463 | |
464 var dA = Statistics.durationsDiscrepancy(durationsA); | |
465 var dB = Statistics.durationsDiscrepancy(durationsB); | |
466 var dC = Statistics.durationsDiscrepancy(durationsC); | |
467 | |
468 assert.isBelow(dA, dB); | |
469 assert.isBelow(dB, dC); | |
470 }); | |
471 | |
472 test('uniformlySampleArray', function() { | |
473 var samples = ['A', 'B', 'C', 'D', 'E']; | |
474 for (var i = samples.length; i >= 0; --i) { | |
475 Statistics.uniformlySampleArray(samples, i); | |
476 assert.lengthOf(samples, i); | |
477 } | |
478 }); | |
479 | |
480 test('uniformlySampleStream', function() { | |
481 var samples = []; | |
482 Statistics.uniformlySampleStream(samples, 1, 'A', 5); | |
483 assert.deepEqual(['A'], samples); | |
484 Statistics.uniformlySampleStream(samples, 2, 'B', 5); | |
485 Statistics.uniformlySampleStream(samples, 3, 'C', 5); | |
486 Statistics.uniformlySampleStream(samples, 4, 'D', 5); | |
487 Statistics.uniformlySampleStream(samples, 5, 'E', 5); | |
488 assert.deepEqual(['A', 'B', 'C', 'D', 'E'], samples); | |
489 | |
490 Statistics.uniformlySampleStream(samples, 6, 'F', 5); | |
491 // Can't really assert anything more than the length since the elements are | |
492 // drawn at random. | |
493 assert.equal(samples.length, 5); | |
494 | |
495 // Try starting with a non-empty array. | |
496 samples = [0, 0, 0]; | |
497 Statistics.uniformlySampleStream(samples, 1, 'G', 5); | |
498 assert.deepEqual(['G', 0, 0], samples); | |
499 }); | |
500 | |
501 test('mergeSampledStreams', function() { | |
502 var samples = []; | |
503 Statistics.mergeSampledStreams(samples, 0, ['A'], 1, 5); | |
504 assert.deepEqual(['A'], samples); | |
505 Statistics.mergeSampledStreams(samples, 1, ['B', 'C', 'D', 'E'], 4, 5); | |
506 assert.deepEqual(['A', 'B', 'C', 'D', 'E'], samples); | |
507 | |
508 Statistics.mergeSampledStreams(samples, 9, ['F', 'G', 'H', 'I', 'J'], 7, 5); | |
509 // Can't really assert anything more than the length since the elements are | |
510 // drawn at random. | |
511 assert.equal(samples.length, 5); | |
512 | |
513 var samples = ['A', 'B']; | |
514 Statistics.mergeSampledStreams(samples, 2, ['F', 'G', 'H', 'I', 'J'], 7, 5); | |
515 assert.equal(samples.length, 5); | |
516 }); | |
517 | |
518 test('mannWhitneyUTestSmokeTest', function() { | |
519 // x < 0.01 | |
520 var sampleA = [1, 2, 2.1, 2.2, 2, 1]; | |
521 var sampleB = [12, 13, 13.1, 13.2, 13, 12]; | |
522 var results = Statistics.mwu(sampleA, sampleB); | |
523 assert.isBelow(results.p, 0.1); | |
524 | |
525 // 0.01 < x < 0.1 | |
526 sampleA = [1, 2, 2.1, 2.2, 2, 1]; | |
527 sampleB = [2, 3, 3.1, 3.2, 3, 2]; | |
528 results = Statistics.mwu(sampleA, sampleB); | |
529 assert.isBelow(results.p, 0.1); | |
530 assert.isAbove(results.p, 0.01); | |
531 | |
532 // 0.1 < x | |
533 sampleA = [1, 2, 2.1, 2.2, 2, 1]; | |
534 sampleB = [1, 2, 2.1, 2.2, 2, 1]; | |
535 results = Statistics.mwu(sampleA, sampleB); | |
536 assert.isAbove(results.p, 0.1); | |
537 }); | |
538 | |
539 test('mannWhitneyUEdgeCases', function() { | |
540 var longRepeatingSample = [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1]; | |
541 var emptySample = []; | |
542 var singleLargeValue = [1000000]; | |
543 // mean 10, std 2 | |
544 var normallyDistributedSample = [ | |
545 8.341540e+0, 7.216640e+0, 8.844310e+0, 9.801980e+0, 1.048760e+1, | |
546 6.915150e+0, 7.881740e+0, 1.131160e+1, 9.959400e+0, 9.030880e+0 | |
547 ]; | |
548 // Identical samples should not cause the null to be rejected. | |
549 var results = Statistics.mwu(longRepeatingSample, longRepeatingSample); | |
550 assert.isAbove(results.p, 0.05); | |
551 results = Statistics.mwu(normallyDistributedSample, | |
552 normallyDistributedSample); | |
553 assert.isAbove(results.p, 0.05); | |
554 results = Statistics.mwu(singleLargeValue, singleLargeValue); | |
555 | |
556 // A single value is generally not sufficient to reject the null, no matter | |
557 // how far off it is. | |
558 results = Statistics.mwu(normallyDistributedSample, singleLargeValue); | |
559 assert.isAbove(results.p, 0.05); | |
560 | |
561 // A single value way outside the first sample may be enough to reject, | |
562 // if the first sample is large enough. | |
563 results = Statistics.mwu(longRepeatingSample, singleLargeValue); | |
564 assert.isBelow(results.p, 0.005); | |
565 | |
566 // Empty samples should not be comparable. | |
567 results = Statistics.mwu(emptySample, emptySample); | |
568 assert(isNaN(results.p)); | |
569 | |
570 // The result of comparing a sample against an empty sample should not be a | |
571 // valid p value. NOTE: The current implementation returns 0, it is up to | |
572 // the caller to interpret this. | |
573 results = Statistics.mwu(normallyDistributedSample, emptySample); | |
574 assert(!results.p); | |
575 }); | |
576 }); | |
577 </script> | |
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