Make PhysicalFileSystem the default

pkg/front_end/lib/compiler_options.dart

 // Copyright (c) 2016, the Dart project authors.  Please see the AUTHORS file
 // for details. All rights reserved. Use of this source code is governed by a
 // BSD-style license that can be found in the LICENSE file.
 
 library front_end.compiler_options;
 
 import 'compilation_error.dart';
 import 'file_system.dart';
+import 'physical_file_system.dart';
 
 /// Callback used to report errors encountered during compilation.
 typedef void ErrorHandler(CompilationError error);
 
 /// Front-end options relevant to compiler back ends.
 ///
 /// Not intended to be implemented or extended by clients.
 class CompilerOptions {
   /// The path to the Dart SDK.
   ///
@@ skipping 65 matching lines @@
   /// flags in sdk/lib/_internal/sdk_library_metadata/lib/libraries.dart.  If
   /// zero, no patch files will be applied.
   int platformBit;
 
   /// The declared variables for use by configurable imports and constant
   /// evaluation.
   Map<String, String> declaredVariables;
 
   /// The [FileSystem] which should be used by the front end to access files.
   ///
-  /// TODO(paulberry): once an implementation of [FileSystem] has been created
-  /// which uses the actual physical file system, make that the default.
-  ///
   /// All file system access performed by the front end goes through this
   /// mechanism, with one exception: if no value is specified for
   /// [packagesFilePath], the packages file is located using the actual physical
   /// file system.  TODO(paulberry): fix this.
-  FileSystem fileSystem;
+  FileSystem fileSystem = PhysicalFileSystem.instance;
 }