Make "--no-packages-dir" the default.

test/get/git/check_out_and_upgrade_test.dart

 // Copyright (c) 2012, the Dart project authors.  Please see the AUTHORS file
 // for details. All rights reserved. Use of this source code is governed by a
 // BSD-style license that can be found in the LICENSE file.
 
 import 'package:scheduled_test/scheduled_test.dart';
 
 import '../../descriptor.dart' as d;
 import '../../test_pub.dart';
 
 main() {
   integration('checks out and upgrades a package from Git', () {
     ensureGit();
 
     d.git('foo.git', [
       d.libDir('foo'),
       d.libPubspec('foo', '1.0.0')
     ]).create();
 
     d.appDir({"foo": {"git": "../foo.git"}}).create();
 
-    pubGet();
+    pubGet(args: ["--packages-dir"]);
 
     d.dir(cachePath, [
       d.dir('git', [
         d.dir('cache', [d.gitPackageRepoCacheDir('foo')]),
         d.gitPackageRevisionCacheDir('foo')
       ])
     ]).validate();
 
     d.dir(packagesPath, [
       d.dir('foo', [
         d.file('foo.dart', 'main() => "foo";')
       ])
     ]).validate();
 
     d.git('foo.git', [
       d.libDir('foo', 'foo 2'),
       d.libPubspec('foo', '1.0.0')
     ]).commit();
 
-    pubUpgrade(output: contains("Changed 1 dependency!"));
+    pubUpgrade(
+        args: ["--packages-dir"],
+        output: contains("Changed 1 dependency!"));
 
     // When we download a new version of the git package, we should re-use the
     // git/cache directory but create a new git/ directory.
     d.dir(cachePath, [
       d.dir('git', [
         d.dir('cache', [d.gitPackageRepoCacheDir('foo')]),
         d.gitPackageRevisionCacheDir('foo'),
         d.gitPackageRevisionCacheDir('foo', 2)
       ])
     ]).validate();
 
     d.dir(packagesPath, [
       d.dir('foo', [
         d.file('foo.dart', 'main() => "foo 2";')
       ])
     ]).validate();
   });
 }