Replace usages of DEPRECATED_java_in_dir with java_files

base/BUILD.gn

Index: base/BUILD.gn
diff --git a/base/BUILD.gn b/base/BUILD.gn
index b5552a671600d849889d51b0db9ab9bcb8ac87f0..ec259fd99008efd71086ab0e9888e0f5a57c925e 100644
--- a/base/BUILD.gn
+++ b/base/BUILD.gn
@@ -2129,7 +2129,67 @@ if (is_android) {
       "//third_party/jsr-305:jsr_305_javalib",
     ]
 
-    DEPRECATED_java_in_dir = "android/java/src"
+    java_files = [
+      "android/java/src/org/chromium/base/ActivityState.java",
+      "android/java/src/org/chromium/base/AnimationFrameTimeHistogram.java",
+      "android/java/src/org/chromium/base/ApiCompatibilityUtils.java",
+      "android/java/src/org/chromium/base/ApkAssets.java",
+      "android/java/src/org/chromium/base/ApplicationStatus.java",
+      "android/java/src/org/chromium/base/BaseChromiumApplication.java",
+      "android/java/src/org/chromium/base/BaseSwitches.java",
+      "android/java/src/org/chromium/base/BuildInfo.java",
+      "android/java/src/org/chromium/base/Callback.java",
+      "android/java/src/org/chromium/base/CollectionUtil.java",
+      "android/java/src/org/chromium/base/CommandLine.java",
+      "android/java/src/org/chromium/base/CommandLineInitUtil.java",
+      "android/java/src/org/chromium/base/ContentUriUtils.java",
+      "android/java/src/org/chromium/base/ContextUtils.java",
+      "android/java/src/org/chromium/base/CpuFeatures.java",
+      "android/java/src/org/chromium/base/EventLog.java",
+      "android/java/src/org/chromium/base/FieldTrialList.java",
+      "android/java/src/org/chromium/base/FileUtils.java",
+      "android/java/src/org/chromium/base/ImportantFileWriterAndroid.java",
+      "android/java/src/org/chromium/base/JNIUtils.java",
+      "android/java/src/org/chromium/base/JavaHandlerThread.java",
+      "android/java/src/org/chromium/base/LocaleUtils.java",
+      "android/java/src/org/chromium/base/Log.java",
+      "android/java/src/org/chromium/base/MemoryPressureListener.java",
+      "android/java/src/org/chromium/base/ObserverList.java",
+      "android/java/src/org/chromium/base/PackageUtils.java",
+      "android/java/src/org/chromium/base/PathService.java",
+      "android/java/src/org/chromium/base/PathUtils.java",
+      "android/java/src/org/chromium/base/PerfTraceEvent.java",
+      "android/java/src/org/chromium/base/PowerMonitor.java",
+      "android/java/src/org/chromium/base/PowerStatusReceiver.java",
+      "android/java/src/org/chromium/base/ResourceExtractor.java",
+      "android/java/src/org/chromium/base/SecureRandomInitializer.java",
+      "android/java/src/org/chromium/base/StreamUtil.java",
+      "android/java/src/org/chromium/base/SysUtils.java",
+      "android/java/src/org/chromium/base/SystemMessageHandler.java",
+      "android/java/src/org/chromium/base/ThreadUtils.java",
+      "android/java/src/org/chromium/base/TraceEvent.java",
+      "android/java/src/org/chromium/base/VisibleForTesting.java",
+      "android/java/src/org/chromium/base/annotations/AccessedByNative.java",
+      "android/java/src/org/chromium/base/annotations/CalledByNative.java",
+      "android/java/src/org/chromium/base/annotations/CalledByNativeUnchecked.java",
+      "android/java/src/org/chromium/base/annotations/JNIAdditionalImport.java",
+      "android/java/src/org/chromium/base/annotations/JNINamespace.java",
+      "android/java/src/org/chromium/base/annotations/MainDex.java",
+      "android/java/src/org/chromium/base/annotations/NativeCall.java",
+      "android/java/src/org/chromium/base/annotations/NativeClassQualifiedName.java",
+      "android/java/src/org/chromium/base/annotations/RemovableInRelease.java",
+      "android/java/src/org/chromium/base/annotations/SuppressFBWarnings.java",
+      "android/java/src/org/chromium/base/annotations/UsedByReflection.java",
+      "android/java/src/org/chromium/base/library_loader/LegacyLinker.java",
+      "android/java/src/org/chromium/base/library_loader/LibraryLoader.java",
+      "android/java/src/org/chromium/base/library_loader/Linker.java",
+      "android/java/src/org/chromium/base/library_loader/LoaderErrors.java",
+      "android/java/src/org/chromium/base/library_loader/ModernLinker.java",
+      "android/java/src/org/chromium/base/library_loader/ProcessInitException.java",
+      "android/java/src/org/chromium/base/metrics/RecordHistogram.java",
+      "android/java/src/org/chromium/base/metrics/RecordUserAction.java",
+      "android/java/src/org/chromium/base/multidex/ChromiumMultiDexInstaller.java",
+    ]
 
     # New versions of BuildConfig.java and NativeLibraries.java
     # (with the actual correct values) will be created when creating an apk.
@@ -2146,7 +2206,14 @@ if (is_android) {
       ":base_java",
       ":base_java_test_support",
     ]
-    DEPRECATED_java_in_dir = "android/javatests/src"
+    java_files = [
+      "android/javatests/src/org/chromium/base/AdvancedMockContextTest.java",
+      "android/javatests/src/org/chromium/base/ApiCompatibilityUtilsTest.java",
+      "android/javatests/src/org/chromium/base/CommandLineInitUtilTest.java",
+      "android/javatests/src/org/chromium/base/CommandLineTest.java",
+      "android/javatests/src/org/chromium/base/ObserverListTest.java",
+      "android/javatests/src/org/chromium/base/metrics/RecordHistogramTest.java",
+    ]
   }
 
   # GYP: //base.gyp:base_java_test_support
@@ -2155,7 +2222,40 @@ if (is_android) {
       ":base_java",
       "//testing/android/reporter:reporter_java",
     ]
-    DEPRECATED_java_in_dir = "test/android/javatests/src"
+    java_files = [
+      "test/android/javatests/src/org/chromium/base/test/BaseActivityInstrumentationTestCase.java",
+      "test/android/javatests/src/org/chromium/base/test/BaseInstrumentationTestRunner.java",
+      "test/android/javatests/src/org/chromium/base/test/BaseTestResult.java",
+      "test/android/javatests/src/org/chromium/base/test/util/AdvancedMockContext.java",
+      "test/android/javatests/src/org/chromium/base/test/util/CommandLineFlags.java",
+      "test/android/javatests/src/org/chromium/base/test/util/DisableIf.java",
+      "test/android/javatests/src/org/chromium/base/test/util/DisableIfSkipCheck.java",
+      "test/android/javatests/src/org/chromium/base/test/util/DisabledTest.java",
+      "test/android/javatests/src/org/chromium/base/test/util/EnormousTest.java",
+      "test/android/javatests/src/org/chromium/base/test/util/Feature.java",
+      "test/android/javatests/src/org/chromium/base/test/util/HostDrivenTest.java",
+      "test/android/javatests/src/org/chromium/base/test/util/InMemorySharedPreferences.java",
+      "test/android/javatests/src/org/chromium/base/test/util/InstrumentationUtils.java",
+      "test/android/javatests/src/org/chromium/base/test/util/IntegrationTest.java",
+      "test/android/javatests/src/org/chromium/base/test/util/Manual.java",
+      "test/android/javatests/src/org/chromium/base/test/util/MetricsUtils.java",
+      "test/android/javatests/src/org/chromium/base/test/util/MinAndroidSdkLevel.java",
+      "test/android/javatests/src/org/chromium/base/test/util/MinAndroidSdkLevelSkipCheck.java",
+      "test/android/javatests/src/org/chromium/base/test/util/PerfTest.java",
+      "test/android/javatests/src/org/chromium/base/test/util/Restriction.java",
+      "test/android/javatests/src/org/chromium/base/test/util/RestrictionSkipCheck.java",
+      "test/android/javatests/src/org/chromium/base/test/util/ScalableTimeout.java",
+      "test/android/javatests/src/org/chromium/base/test/util/SkipCheck.java",
+      "test/android/javatests/src/org/chromium/base/test/util/TestFileUtil.java",
+      "test/android/javatests/src/org/chromium/base/test/util/TestThread.java",
+      "test/android/javatests/src/org/chromium/base/test/util/TimeoutScale.java",
+      "test/android/javatests/src/org/chromium/base/test/util/UrlUtils.java",
+      "test/android/javatests/src/org/chromium/base/test/util/parameter/BaseParameter.java",
+      "test/android/javatests/src/org/chromium/base/test/util/parameter/Parameter.java",
+      "test/android/javatests/src/org/chromium/base/test/util/parameter/Parameterizable.java",
+      "test/android/javatests/src/org/chromium/base/test/util/parameter/ParameterizedTest.java",
+      "test/android/javatests/src/org/chromium/base/test/util/parameter/parameters/MethodParameter.java",
+    ]
   }
 
   # TODO(jbudorick): Remove this once we roll to robolectric 3.0 and pull