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Issue 1232833004: Update findbugs from 3.0.0 to 3.0.1. (Closed) Base URL: https://chromium.googlesource.com/chromium/deps/findbugs.git@master
Patch Set: rebase again Created 5 years, 5 months ago
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Index: doc/manual/datamining.html
diff --git a/doc/manual/datamining.html b/doc/manual/datamining.html
index 134801a819e0c2cffee0319f5269228887a43b91..f1068a639d5614842d89771f49fcf814620bbd7e 100644
--- a/doc/manual/datamining.html
+++ b/doc/manual/datamining.html
@@ -1,6 +1,6 @@
<html><head>
<meta http-equiv="Content-Type" content="text/html; charset=ISO-8859-1">
- <title>Chapter&nbsp;12.&nbsp;Data mining of bugs with FindBugs&#8482;</title><meta name="generator" content="DocBook XSL Stylesheets V1.76.1"><link rel="home" href="index.html" title="FindBugs&#8482; Manual"><link rel="up" href="index.html" title="FindBugs&#8482; Manual"><link rel="prev" href="rejarForAnalysis.html" title="Chapter&nbsp;11.&nbsp;Using rejarForAnalysis"><link rel="next" href="license.html" title="Chapter&nbsp;13.&nbsp;License"></head><body bgcolor="white" text="black" link="#0000FF" vlink="#840084" alink="#0000FF"><div class="navheader"><table width="100%" summary="Navigation header"><tr><th colspan="3" align="center">Chapter&nbsp;12.&nbsp;Data mining of bugs with <span class="application">FindBugs</span>&#8482;</th></tr><tr><td width="20%" align="left"><a accesskey="p" href="rejarForAnalysis.html">Prev</a>&nbsp;</td><th width="60%" align="center">&nbsp;</th><td width="20%" align="right">&nbsp;<a accesskey="n" href="license.html">Next</a></td></tr></table><hr></div><div class="chapter" title="Chapter&nbsp;12.&nbsp;Data mining of bugs with FindBugs&#8482;"><div class="titlepage"><div><div><h2 class="title"><a name="datamining"></a>Chapter&nbsp;12.&nbsp;Data mining of bugs with <span class="application">FindBugs</span>&#8482;</h2></div></div></div><div class="toc"><p><b>Table of Contents</b></p><dl><dt><span class="sect1"><a href="datamining.html#commands">1. Commands</a></span></dt><dt><span class="sect1"><a href="datamining.html#examples">2. Examples</a></span></dt><dt><span class="sect1"><a href="datamining.html#antexample">3. Ant example</a></span></dt></dl></div><p>
+ <title>Chapter&nbsp;12.&nbsp;Data mining of bugs with FindBugs&#8482;</title><meta name="generator" content="DocBook XSL Stylesheets V1.78.1"><link rel="home" href="index.html" title="FindBugs&#8482; Manual"><link rel="up" href="index.html" title="FindBugs&#8482; Manual"><link rel="prev" href="rejarForAnalysis.html" title="Chapter&nbsp;11.&nbsp;Using rejarForAnalysis"><link rel="next" href="license.html" title="Chapter&nbsp;13.&nbsp;License"></head><body bgcolor="white" text="black" link="#0000FF" vlink="#840084" alink="#0000FF"><div class="navheader"><table width="100%" summary="Navigation header"><tr><th colspan="3" align="center">Chapter&nbsp;12.&nbsp;Data mining of bugs with <span class="application">FindBugs</span>&#8482;</th></tr><tr><td width="20%" align="left"><a accesskey="p" href="rejarForAnalysis.html">Prev</a>&nbsp;</td><th width="60%" align="center">&nbsp;</th><td width="20%" align="right">&nbsp;<a accesskey="n" href="license.html">Next</a></td></tr></table><hr></div><div class="chapter"><div class="titlepage"><div><div><h1 class="title"><a name="datamining"></a>Chapter&nbsp;12.&nbsp;Data mining of bugs with <span class="application">FindBugs</span>&#8482;</h1></div></div></div><div class="toc"><p><b>Table of Contents</b></p><dl class="toc"><dt><span class="sect1"><a href="datamining.html#commands">1. Commands</a></span></dt><dt><span class="sect1"><a href="datamining.html#examples">2. Examples</a></span></dt><dt><span class="sect1"><a href="datamining.html#antexample">3. Ant example</a></span></dt></dl></div><p>
FindBugs incorporates an ability to perform sophisticated queries on bug
databases and track warnings across multiple versions of code being
studied, allowing you to do things such as seeing when a bug was first introduced, examining
@@ -39,11 +39,11 @@ the examples assume that the <code class="literal">findbugs.lib</code>
&lt;/fileset&gt;
&lt;/path&gt;
-</pre><div class="sect1" title="1.&nbsp;Commands"><div class="titlepage"><div><div><h2 class="title" style="clear: both"><a name="commands"></a>1.&nbsp;Commands</h2></div></div></div><p>
+</pre><div class="sect1"><div class="titlepage"><div><div><h2 class="title" style="clear: both"><a name="commands"></a>1.&nbsp;Commands</h2></div></div></div><p>
All tools for FindBugs data mining are can be invoked from the command line,
and some of the more useful tools can also be invoked from an
ant build file.</p><p>
-Briefly, the command-line tools are:</p><div class="variablelist"><dl><dt><span class="term"><span class="command"><strong><a class="link" href="datamining.html#unionBugs" title="1.1.&nbsp;unionBugs">unionBugs</a></strong></span></span></dt><dd><p>
+Briefly, the command-line tools are:</p><div class="variablelist"><dl class="variablelist"><dt><span class="term"><span class="command"><strong><a class="link" href="datamining.html#unionBugs" title="1.1.&nbsp;unionBugs">unionBugs</a></strong></span></span></dt><dd><p>
combine the results from separate analysis of disjoint
classes
</p></dd><dt><span class="term"><span class="command"><strong><a class="link" href="datamining.html#computeBugHistory" title="1.2.&nbsp;computeBugHistory">computeBugHistory</a></strong></span></span></dt><dd><p>Merge bug warnings from multiple versions of
@@ -57,11 +57,11 @@ timestamp for a list of XML bug databases</p></dd><dt><span class="term"><span c
version of a multiversion bug database</p></dd><dt><span class="term"><span class="command"><strong><a class="link" href="datamining.html#defectDensity" title="1.5.&nbsp;defectDensity">defectDensity</a></strong></span></span></dt><dd><p>List information about defect density
(warnings per 1000 NCSS)
for the entire project and each class and package</p></dd><dt><span class="term"><span class="command"><strong><a class="link" href="datamining.html#convertXmlToText" title="1.6.&nbsp;convertXmlToText">convertXmlToText</a></strong></span></span></dt><dd><p>Convert bug warnings in XML format to
- a textual one-line-per-bug format, or to HTML</p></dd></dl></div><div class="sect2" title="1.1.&nbsp;unionBugs"><div class="titlepage"><div><div><h3 class="title"><a name="unionBugs"></a>1.1.&nbsp;unionBugs</h3></div></div></div><p>
+ a textual one-line-per-bug format, or to HTML</p></dd></dl></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="unionBugs"></a>1.1.&nbsp;unionBugs</h3></div></div></div><p>
If you have, for example, separately analyzing each jar file used in an application,
you can use this command to combine the separately generated xml bug warning files into
a single file containing all of the warnings.</p><p>Do <span class="emphasis"><em>not</em></span> use this command to combine results from analyzing different versions of the same
- file; use <span class="command"><strong>computeBugHistory</strong></span> instead.</p><p>Specify the xml files on the command line. The result is sent to standard output.</p></div><div class="sect2" title="1.2.&nbsp;computeBugHistory"><div class="titlepage"><div><div><h3 class="title"><a name="computeBugHistory"></a>1.2.&nbsp;computeBugHistory</h3></div></div></div><p>Use this command to generate a bug database containing information from different builds or versions
+ file; use <span class="command"><strong>computeBugHistory</strong></span> instead.</p><p>Specify the xml files on the command line. The result is sent to standard output.</p></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="computeBugHistory"></a>1.2.&nbsp;computeBugHistory</h3></div></div></div><p>Use this command to generate a bug database containing information from different builds or versions
of software you are analyzing.
History is taken from the first file provided as input; any following
files should be single version bug databases (if they contain history, the history in those
@@ -85,7 +85,7 @@ To specify input files, nest them inside with a
&lt;datafile name="analyze2.xml"/&gt;
&lt;/computeBugHistory&gt;
-</pre><div class="table"><a name="computeBugHistoryTable"></a><p class="title"><b>Table&nbsp;12.1.&nbsp;Options for computeBugHistory command</b></p><div class="table-contents"><table summary="Options for computeBugHistory command" border="1"><colgroup><col><col><col></colgroup><thead><tr><th align="left">Command-line option</th><th align="left">Ant attribute</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">-output &lt;file&gt;</td><td align="left">output="&lt;file&gt;"</td><td align="left">save output in the named file (may also be an input file)</td></tr><tr><td align="left">-overrideRevisionNames[:truth]</td><td align="left">overrideRevisionNames="[true|false]"</td><td align="left">override revision names for each version with names computed from the filenames</td></tr><tr><td align="left">-noPackageMoves[:truth]</td><td align="left">noPackageMoves="[true|false]"</td><td align="left">if a class has moved to another package, treat warnings in that class as seperate</td></tr><tr><td align="left">-preciseMatch[:truth]</td><td align="left">preciseMatch="[true|false]"</td><td align="left">require bug patterns to match precisely</td></tr><tr><td align="left">-precisePriorityMatch[:truth]</td><td align="left">precisePriorityMatch="[true|false]"</td><td align="left">consider two warnings as the same only if priorities match exactly</td></tr><tr><td align="left">-quiet[:truth]</td><td align="left">quiet="[true|false]"</td><td align="left">don't generate any output to standard out unless there is an error</td></tr><tr><td align="left">-withMessages[:truth]</td><td align="left">withMessages="[true|false]"</td><td align="left">include human-readable messages describing the warnings in XML output</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2" title="1.3.&nbsp;filterBugs"><div class="titlepage"><div><div><h3 class="title"><a name="filterBugs"></a>1.3.&nbsp;filterBugs</h3></div></div></div><p>This command is used to select a subset of warnings from a FindBugs XML warning file
+</pre><div class="table"><a name="computeBugHistoryTable"></a><p class="title"><b>Table&nbsp;12.1.&nbsp;Options for computeBugHistory command</b></p><div class="table-contents"><table summary="Options for computeBugHistory command" border="1"><colgroup><col><col><col></colgroup><thead><tr><th align="left">Command-line option</th><th align="left">Ant attribute</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">-output &lt;file&gt;</td><td align="left">output="&lt;file&gt;"</td><td align="left">save output in the named file (may also be an input file)</td></tr><tr><td align="left">-overrideRevisionNames[:truth]</td><td align="left">overrideRevisionNames="[true|false]"</td><td align="left">override revision names for each version with names computed from the filenames</td></tr><tr><td align="left">-noPackageMoves[:truth]</td><td align="left">noPackageMoves="[true|false]"</td><td align="left">if a class has moved to another package, treat warnings in that class as seperate</td></tr><tr><td align="left">-preciseMatch[:truth]</td><td align="left">preciseMatch="[true|false]"</td><td align="left">require bug patterns to match precisely</td></tr><tr><td align="left">-precisePriorityMatch[:truth]</td><td align="left">precisePriorityMatch="[true|false]"</td><td align="left">consider two warnings as the same only if priorities match exactly</td></tr><tr><td align="left">-quiet[:truth]</td><td align="left">quiet="[true|false]"</td><td align="left">don't generate any output to standard out unless there is an error</td></tr><tr><td align="left">-withMessages[:truth]</td><td align="left">withMessages="[true|false]"</td><td align="left">include human-readable messages describing the warnings in XML output</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="filterBugs"></a>1.3.&nbsp;filterBugs</h3></div></div></div><p>This command is used to select a subset of warnings from a FindBugs XML warning file
and write the selected subset to a new FindBugs warning file.</p><p>
This command takes a sequence of options, and either zero, one or two
filenames of findbugs xml bug files on the command line.</p><p>If no file names are provided, the command reads from standard input
@@ -110,7 +110,7 @@ the ant call with a <code class="literal">&lt;datafile&gt;</code> element. For
&lt;datafile name="analyze.xml"/&gt;
&lt;/filterBugs&gt;
-</pre><div class="table"><a name="filterOptionsTable"></a><p class="title"><b>Table&nbsp;12.2.&nbsp;Options for filterBugs command</b></p><div class="table-contents"><table summary="Options for filterBugs command" border="1"><colgroup><col><col><col></colgroup><thead><tr><th align="left">Command-line option</th><th align="left">Ant attribute</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">&nbsp;</td><td align="left">input="&lt;file&gt;"</td><td align="left">use file as input</td></tr><tr><td align="left">&nbsp;</td><td align="left">output="&lt;file&gt;"</td><td align="left">output results to file</td></tr><tr><td align="left">-not</td><td align="left">not="[true|false]"</td><td align="left">reverse (all) switches for the filter</td></tr><tr><td align="left">-withSource[:truth]</td><td align="left">withSource="[true|false]"</td><td align="left">only warnings for switch source is available</td></tr><tr><td align="left">-exclude &lt;filter file&gt;</td><td align="left">exclude="&lt;filter file&gt;"</td><td align="left">exclude bugs matching given filter</td></tr><tr><td align="left">-include &lt;filter file&gt;</td><td align="left">include="&lt;filter file&gt;"</td><td align="left">include only bugs matching given filter</td></tr><tr><td align="left">-annotation &lt;text&gt;</td><td align="left">annotation="&lt;text&gt;"</td><td align="left">allow only warnings containing this text in a manual annotation</td></tr><tr><td align="left">-after &lt;when&gt;</td><td align="left">after="&lt;when&gt;"</td><td align="left">allow only warnings that first occurred after this version</td></tr><tr><td align="left">-before &lt;when&gt;</td><td align="left">before="&lt;when&gt;"</td><td align="left">allow only warnings that first occurred before this version</td></tr><tr><td align="left">-first &lt;when&gt;</td><td align="left">first="&lt;when&gt;"</td><td align="left">allow only warnings that first occurred in this version</td></tr><tr><td align="left">-last &lt;when&gt;</td><td align="left">last="&lt;when&gt;"</td><td align="left">allow only warnings that last occurred in this version</td></tr><tr><td align="left">-fixed &lt;when&gt;</td><td align="left">fixed="&lt;when&gt;"</td><td align="left">allow only warnings that last occurred in the previous version (clobbers <code class="option">-last</code>)</td></tr><tr><td align="left">-present &lt;when&gt;</td><td align="left">present="&lt;when&gt;"</td><td align="left">allow only warnings present in this version</td></tr><tr><td align="left">-absent &lt;when&gt;</td><td align="left">absent="&lt;when&gt;"</td><td align="left">allow only warnings absent in this version</td></tr><tr><td align="left">-active[:truth]</td><td align="left">active="[true|false]"</td><td align="left">allow only warnings alive in the last sequence number</td></tr><tr><td align="left">-introducedByChange[:truth]</td><td align="left">introducedByChange="[true|false]"</td><td align="left">allow only warnings introduced by a change of an existing class</td></tr><tr><td align="left">-removedByChange[:truth]</td><td align="left">removedByChange="[true|false]"</td><td align="left">allow only warnings removed by a change of a persisting class</td></tr><tr><td align="left">-newCode[:truth]</td><td align="left">newCode="[true|false]"</td><td align="left">allow only warnings introduced by the addition of a new class</td></tr><tr><td align="left">-removedCode[:truth]</td><td align="left">removedCode="[true|false]"</td><td align="left">allow only warnings removed by removal of a class</td></tr><tr><td align="left">-priority &lt;level&gt;</td><td align="left">priority="&lt;level&gt;"</td><td align="left">allow only warnings with this priority or higher</td></tr><tr><td align="left">-maxRank &lt;rank&gt;</td><td align="left">rank="[1..20]"</td><td align="left">allow only warnings with this rank or lower</td></tr><tr><td align="left">-class &lt;pattern&gt;</td><td align="left">class="&lt;class&gt;"</td><td align="left">allow only bugs whose primary class name matches this pattern</td></tr><tr><td align="left">-bugPattern &lt;pattern&gt;</td><td align="left">bugPattern="&lt;pattern&gt;"</td><td align="left">allow only bugs whose type matches this pattern</td></tr><tr><td align="left">-category &lt;category&gt;</td><td align="left">category="&lt;category&gt;"</td><td align="left">allow only warnings with a category that starts with this string</td></tr><tr><td align="left">-designation &lt;designation&gt;</td><td align="left">designation="&lt;designation&gt;"</td><td align="left">allow only warnings with this designation (e.g., -designation SHOULD_FIX)</td></tr><tr><td align="left">-withMessages[:truth] </td><td align="left">withMessages="[true|false]"</td><td align="left">the generated XML should contain textual messages</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2" title="1.4.&nbsp;mineBugHistory"><div class="titlepage"><div><div><h3 class="title"><a name="mineBugHistory"></a>1.4.&nbsp;mineBugHistory</h3></div></div></div><p>This command generates a table containing counts of the numbers of warnings
+</pre><div class="table"><a name="filterOptionsTable"></a><p class="title"><b>Table&nbsp;12.2.&nbsp;Options for filterBugs command</b></p><div class="table-contents"><table summary="Options for filterBugs command" border="1"><colgroup><col><col><col></colgroup><thead><tr><th align="left">Command-line option</th><th align="left">Ant attribute</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">&nbsp;</td><td align="left">input="&lt;file&gt;"</td><td align="left">use file as input</td></tr><tr><td align="left">&nbsp;</td><td align="left">output="&lt;file&gt;"</td><td align="left">output results to file</td></tr><tr><td align="left">-not</td><td align="left">not="[true|false]"</td><td align="left">reverse (all) switches for the filter</td></tr><tr><td align="left">-withSource[:truth]</td><td align="left">withSource="[true|false]"</td><td align="left">only warnings for switch source is available</td></tr><tr><td align="left">-exclude &lt;filter file&gt;</td><td align="left">exclude="&lt;filter file&gt;"</td><td align="left">exclude bugs matching given filter</td></tr><tr><td align="left">-include &lt;filter file&gt;</td><td align="left">include="&lt;filter file&gt;"</td><td align="left">include only bugs matching given filter</td></tr><tr><td align="left">-annotation &lt;text&gt;</td><td align="left">annotation="&lt;text&gt;"</td><td align="left">allow only warnings containing this text in a manual annotation</td></tr><tr><td align="left">-after &lt;when&gt;</td><td align="left">after="&lt;when&gt;"</td><td align="left">allow only warnings that first occurred after this version</td></tr><tr><td align="left">-before &lt;when&gt;</td><td align="left">before="&lt;when&gt;"</td><td align="left">allow only warnings that first occurred before this version</td></tr><tr><td align="left">-first &lt;when&gt;</td><td align="left">first="&lt;when&gt;"</td><td align="left">allow only warnings that first occurred in this version</td></tr><tr><td align="left">-last &lt;when&gt;</td><td align="left">last="&lt;when&gt;"</td><td align="left">allow only warnings that last occurred in this version</td></tr><tr><td align="left">-fixed &lt;when&gt;</td><td align="left">fixed="&lt;when&gt;"</td><td align="left">allow only warnings that last occurred in the previous version (clobbers <code class="option">-last</code>)</td></tr><tr><td align="left">-present &lt;when&gt;</td><td align="left">present="&lt;when&gt;"</td><td align="left">allow only warnings present in this version</td></tr><tr><td align="left">-absent &lt;when&gt;</td><td align="left">absent="&lt;when&gt;"</td><td align="left">allow only warnings absent in this version</td></tr><tr><td align="left">-active[:truth]</td><td align="left">active="[true|false]"</td><td align="left">allow only warnings alive in the last sequence number</td></tr><tr><td align="left">-introducedByChange[:truth]</td><td align="left">introducedByChange="[true|false]"</td><td align="left">allow only warnings introduced by a change of an existing class</td></tr><tr><td align="left">-removedByChange[:truth]</td><td align="left">removedByChange="[true|false]"</td><td align="left">allow only warnings removed by a change of a persisting class</td></tr><tr><td align="left">-newCode[:truth]</td><td align="left">newCode="[true|false]"</td><td align="left">allow only warnings introduced by the addition of a new class</td></tr><tr><td align="left">-removedCode[:truth]</td><td align="left">removedCode="[true|false]"</td><td align="left">allow only warnings removed by removal of a class</td></tr><tr><td align="left">-priority &lt;level&gt;</td><td align="left">priority="&lt;level&gt;"</td><td align="left">allow only warnings with this priority or higher</td></tr><tr><td align="left">-maxRank &lt;rank&gt;</td><td align="left">rank="[1..20]"</td><td align="left">allow only warnings with this rank or lower</td></tr><tr><td align="left">-class &lt;pattern&gt;</td><td align="left">class="&lt;class&gt;"</td><td align="left">allow only bugs whose primary class name matches this pattern</td></tr><tr><td align="left">-bugPattern &lt;pattern&gt;</td><td align="left">bugPattern="&lt;pattern&gt;"</td><td align="left">allow only bugs whose type matches this pattern</td></tr><tr><td align="left">-category &lt;category&gt;</td><td align="left">category="&lt;category&gt;"</td><td align="left">allow only warnings with a category that starts with this string</td></tr><tr><td align="left">-designation &lt;designation&gt;</td><td align="left">designation="&lt;designation&gt;"</td><td align="left">allow only warnings with this designation (e.g., -designation SHOULD_FIX)</td></tr><tr><td align="left">-withMessages[:truth] </td><td align="left">withMessages="[true|false]"</td><td align="left">the generated XML should contain textual messages</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="mineBugHistory"></a>1.4.&nbsp;mineBugHistory</h3></div></div></div><p>This command generates a table containing counts of the numbers of warnings
in each version of a multiversion bug database.</p><p>This functionality may also can be accessed from ant.
First create a taskdef for <span class="command"><strong>mineBugHistory</strong></span> in your
build file:
@@ -137,12 +137,12 @@ attribute or nest it inside the ant call with a
first column value. This option also causes <code class="option">-formatDates</code>
to render dates in terser format without embedded whitespace.
</p><p>The table is a tab-separated (barring <code class="option">-noTabs</code>)
- table with the following columns:</p><div class="table"><a name="mineBugHistoryColumns"></a><p class="title"><b>Table&nbsp;12.4.&nbsp;Columns in mineBugHistory output</b></p><div class="table-contents"><table summary="Columns in mineBugHistory output" border="1"><colgroup><col><col></colgroup><thead><tr><th align="left">Title</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">seq</td><td align="left">Sequence number (successive integers, starting at 0)</td></tr><tr><td align="left">version</td><td align="left">Version name</td></tr><tr><td align="left">time</td><td align="left">Release timestamp</td></tr><tr><td align="left">classes</td><td align="left">Number of classes analyzed</td></tr><tr><td align="left">NCSS</td><td align="left">Non Commenting Source Statements</td></tr><tr><td align="left">added</td><td align="left">Count of new warnings for a class that existed in the previous version</td></tr><tr><td align="left">newCode</td><td align="left">Count of new warnings for a class that did not exist in the previous version</td></tr><tr><td align="left">fixed</td><td align="left">Count of warnings removed from a class that remains in the current version</td></tr><tr><td align="left">removed</td><td align="left">Count of warnings in the previous version for a class that is not present in the current version</td></tr><tr><td align="left">retained</td><td align="left">Count of warnings that were in both the previous and current version</td></tr><tr><td align="left">dead</td><td align="left">Warnings that were present in earlier versions but in neither the current version or the immediately preceeding version</td></tr><tr><td align="left">active</td><td align="left">Total warnings present in the current version</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2" title="1.5.&nbsp;defectDensity"><div class="titlepage"><div><div><h3 class="title"><a name="defectDensity"></a>1.5.&nbsp;defectDensity</h3></div></div></div><p>
+ table with the following columns:</p><div class="table"><a name="mineBugHistoryColumns"></a><p class="title"><b>Table&nbsp;12.4.&nbsp;Columns in mineBugHistory output</b></p><div class="table-contents"><table summary="Columns in mineBugHistory output" border="1"><colgroup><col><col></colgroup><thead><tr><th align="left">Title</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">seq</td><td align="left">Sequence number (successive integers, starting at 0)</td></tr><tr><td align="left">version</td><td align="left">Version name</td></tr><tr><td align="left">time</td><td align="left">Release timestamp</td></tr><tr><td align="left">classes</td><td align="left">Number of classes analyzed</td></tr><tr><td align="left">NCSS</td><td align="left">Non Commenting Source Statements</td></tr><tr><td align="left">added</td><td align="left">Count of new warnings for a class that existed in the previous version</td></tr><tr><td align="left">newCode</td><td align="left">Count of new warnings for a class that did not exist in the previous version</td></tr><tr><td align="left">fixed</td><td align="left">Count of warnings removed from a class that remains in the current version</td></tr><tr><td align="left">removed</td><td align="left">Count of warnings in the previous version for a class that is not present in the current version</td></tr><tr><td align="left">retained</td><td align="left">Count of warnings that were in both the previous and current version</td></tr><tr><td align="left">dead</td><td align="left">Warnings that were present in earlier versions but in neither the current version or the immediately preceeding version</td></tr><tr><td align="left">active</td><td align="left">Total warnings present in the current version</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="defectDensity"></a>1.5.&nbsp;defectDensity</h3></div></div></div><p>
This command lists information about defect density (warnings per 1000 NCSS) for the entire project and each class and package.
It can either be invoked with no files specified on the command line (in which case it reads from standard input)
or with one file specified on the command line.</p><p>It generates a table with the following columns, and with one
row for the entire project, and one row for each package or class that contains at least
-4 warnings.</p><div class="table"><a name="defectDensityColumns"></a><p class="title"><b>Table&nbsp;12.5.&nbsp;Columns in defectDensity output</b></p><div class="table-contents"><table summary="Columns in defectDensity output" border="1"><colgroup><col><col></colgroup><thead><tr><th align="left">Title</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">kind</td><td align="left">project, package or class</td></tr><tr><td align="left">name</td><td align="left">The name of the project, package or class</td></tr><tr><td align="left">density</td><td align="left">Number of warnings generated per 1000 lines of NCSS.</td></tr><tr><td align="left">bugs</td><td align="left">Number of warnings</td></tr><tr><td align="left">NCSS</td><td align="left">Calculated number of NCSS</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2" title="1.6.&nbsp;convertXmlToText"><div class="titlepage"><div><div><h3 class="title"><a name="convertXmlToText"></a>1.6.&nbsp;convertXmlToText</h3></div></div></div><p>
+4 warnings.</p><div class="table"><a name="defectDensityColumns"></a><p class="title"><b>Table&nbsp;12.5.&nbsp;Columns in defectDensity output</b></p><div class="table-contents"><table summary="Columns in defectDensity output" border="1"><colgroup><col><col></colgroup><thead><tr><th align="left">Title</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">kind</td><td align="left">project, package or class</td></tr><tr><td align="left">name</td><td align="left">The name of the project, package or class</td></tr><tr><td align="left">density</td><td align="left">Number of warnings generated per 1000 lines of NCSS.</td></tr><tr><td align="left">bugs</td><td align="left">Number of warnings</td></tr><tr><td align="left">NCSS</td><td align="left">Calculated number of NCSS</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="convertXmlToText"></a>1.6.&nbsp;convertXmlToText</h3></div></div></div><p>
This command converts a warning collection in XML format to a text
format with one line per warning, or to HTML.
</p><p>This functionality may also can be accessed from ant.
@@ -162,7 +162,7 @@ build file:
When applying a stylesheet other than those included
with FindBugs (listed above), the -html/format option should be used
with a path or URL to the stylesheet.
- </p></div><div class="sect2" title="1.7.&nbsp;setBugDatabaseInfo"><div class="titlepage"><div><div><h3 class="title"><a name="setBugDatabaseInfo"></a>1.7.&nbsp;setBugDatabaseInfo</h3></div></div></div><p>
+ </p></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="setBugDatabaseInfo"></a>1.7.&nbsp;setBugDatabaseInfo</h3></div></div></div><p>
This command sets meta-information in a specified warning collection.
It takes the following options:
</p><p>This functionality may also can be accessed from ant.
@@ -184,11 +184,11 @@ attribute or nest it inside the ant call with a
&lt;datafile name="analyze.xml"/&gt;
&lt;/setBugDatabaseInfo&gt;
-</pre><div class="table"><a name="setBugDatabaseInfoOptions"></a><p class="title"><b>Table&nbsp;12.7.&nbsp;setBugDatabaseInfo Options</b></p><div class="table-contents"><table summary="setBugDatabaseInfo Options" border="1"><colgroup><col><col><col></colgroup><thead><tr><th align="left">Command-line option</th><th align="left">Ant attribute</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">&nbsp;</td><td align="left">input="&lt;file&gt;"</td><td align="left">use file as input</td></tr><tr><td align="left">&nbsp;</td><td align="left">output="&lt;file&gt;"</td><td align="left">write output to file</td></tr><tr><td align="left">-name &lt;name&gt;</td><td align="left">name="&lt;name&gt;"</td><td align="left">set name for (last) revision</td></tr><tr><td align="left">-timestamp &lt;when&gt;</td><td align="left">timestamp="&lt;when&gt;"</td><td align="left">set timestamp for (last) revision</td></tr><tr><td align="left">-source &lt;directory&gt;</td><td align="left">source="&lt;directory&gt;"</td><td align="left">add specified directory to the source search path</td></tr><tr><td align="left">-findSource &lt;directory&gt;</td><td align="left">findSource="&lt;directory&gt;"</td><td align="left">find and add all relevant source directions contained within specified directory</td></tr><tr><td align="left">-suppress &lt;filter file&gt;</td><td align="left">suppress="&lt;filter file&gt;"</td><td align="left">suppress warnings matched by this file (replaces previous suppressions)</td></tr><tr><td align="left">-withMessages</td><td align="left">withMessages="[true|false]"</td><td align="left">add textual messages to XML</td></tr><tr><td align="left">-resetSource</td><td align="left">resetSource="[true|false]"</td><td align="left">remove all source search paths</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2" title="1.8.&nbsp;listBugDatabaseInfo"><div class="titlepage"><div><div><h3 class="title"><a name="listBugDatabaseInfo"></a>1.8.&nbsp;listBugDatabaseInfo</h3></div></div></div><p>This command takes a list of zero or more xml bug database filenames on the command line.
+</pre><div class="table"><a name="setBugDatabaseInfoOptions"></a><p class="title"><b>Table&nbsp;12.7.&nbsp;setBugDatabaseInfo Options</b></p><div class="table-contents"><table summary="setBugDatabaseInfo Options" border="1"><colgroup><col><col><col></colgroup><thead><tr><th align="left">Command-line option</th><th align="left">Ant attribute</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">&nbsp;</td><td align="left">input="&lt;file&gt;"</td><td align="left">use file as input</td></tr><tr><td align="left">&nbsp;</td><td align="left">output="&lt;file&gt;"</td><td align="left">write output to file</td></tr><tr><td align="left">-name &lt;name&gt;</td><td align="left">name="&lt;name&gt;"</td><td align="left">set name for (last) revision</td></tr><tr><td align="left">-timestamp &lt;when&gt;</td><td align="left">timestamp="&lt;when&gt;"</td><td align="left">set timestamp for (last) revision</td></tr><tr><td align="left">-source &lt;directory&gt;</td><td align="left">source="&lt;directory&gt;"</td><td align="left">add specified directory to the source search path</td></tr><tr><td align="left">-findSource &lt;directory&gt;</td><td align="left">findSource="&lt;directory&gt;"</td><td align="left">find and add all relevant source directions contained within specified directory</td></tr><tr><td align="left">-suppress &lt;filter file&gt;</td><td align="left">suppress="&lt;filter file&gt;"</td><td align="left">suppress warnings matched by this file (replaces previous suppressions)</td></tr><tr><td align="left">-withMessages</td><td align="left">withMessages="[true|false]"</td><td align="left">add textual messages to XML</td></tr><tr><td align="left">-resetSource</td><td align="left">resetSource="[true|false]"</td><td align="left">remove all source search paths</td></tr></tbody></table></div></div><br class="table-break"></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="listBugDatabaseInfo"></a>1.8.&nbsp;listBugDatabaseInfo</h3></div></div></div><p>This command takes a list of zero or more xml bug database filenames on the command line.
If zero file names are provided, it reads from standard input and does not generate
a table header.</p><p>There is only one option: <code class="option">-formatDates</code> renders dates
in textual form.
- </p><p>The output is a table one row per bug database and the following columns:</p><div class="table"><a name="listBugDatabaseInfoColumns"></a><p class="title"><b>Table&nbsp;12.8.&nbsp;listBugDatabaseInfo Columns</b></p><div class="table-contents"><table summary="listBugDatabaseInfo Columns" border="1"><colgroup><col><col></colgroup><thead><tr><th align="left">Column</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">version</td><td align="left">version name</td></tr><tr><td align="left">time</td><td align="left">Release timestamp</td></tr><tr><td align="left">classes</td><td align="left">Number of classes analyzed</td></tr><tr><td align="left">NCSS</td><td align="left">Non Commenting Source Statements analyzed</td></tr><tr><td align="left">total</td><td align="left">Total number of warnings of all kinds</td></tr><tr><td align="left">high</td><td align="left">Total number of high priority warnings of all kinds</td></tr><tr><td align="left">medium</td><td align="left">Total number of medium/normal priority warnings of all kinds</td></tr><tr><td align="left">low</td><td align="left">Total number of low priority warnings of all kinds</td></tr><tr><td align="left">filename</td><td align="left">filename of database</td></tr></tbody></table></div></div><br class="table-break"></div></div><div class="sect1" title="2.&nbsp;Examples"><div class="titlepage"><div><div><h2 class="title" style="clear: both"><a name="examples"></a>2.&nbsp;Examples</h2></div></div></div><div class="sect2" title="2.1.&nbsp;Mining history using proveded shell scrips"><div class="titlepage"><div><div><h3 class="title"><a name="unixscriptsexamples"></a>2.1.&nbsp;Mining history using proveded shell scrips</h3></div></div></div><p>In all of the following, the commands are given in a directory that contains
+ </p><p>The output is a table one row per bug database and the following columns:</p><div class="table"><a name="listBugDatabaseInfoColumns"></a><p class="title"><b>Table&nbsp;12.8.&nbsp;listBugDatabaseInfo Columns</b></p><div class="table-contents"><table summary="listBugDatabaseInfo Columns" border="1"><colgroup><col><col></colgroup><thead><tr><th align="left">Column</th><th align="left">Meaning</th></tr></thead><tbody><tr><td align="left">version</td><td align="left">version name</td></tr><tr><td align="left">time</td><td align="left">Release timestamp</td></tr><tr><td align="left">classes</td><td align="left">Number of classes analyzed</td></tr><tr><td align="left">NCSS</td><td align="left">Non Commenting Source Statements analyzed</td></tr><tr><td align="left">total</td><td align="left">Total number of warnings of all kinds</td></tr><tr><td align="left">high</td><td align="left">Total number of high priority warnings of all kinds</td></tr><tr><td align="left">medium</td><td align="left">Total number of medium/normal priority warnings of all kinds</td></tr><tr><td align="left">low</td><td align="left">Total number of low priority warnings of all kinds</td></tr><tr><td align="left">filename</td><td align="left">filename of database</td></tr></tbody></table></div></div><br class="table-break"></div></div><div class="sect1"><div class="titlepage"><div><div><h2 class="title" style="clear: both"><a name="examples"></a>2.&nbsp;Examples</h2></div></div></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="unixscriptsexamples"></a>2.1.&nbsp;Mining history using proveded shell scrips</h3></div></div></div><p>In all of the following, the commands are given in a directory that contains
directories jdk1.6.0-b12, jdk1.6.0-b13, ..., jdk1.6.0-b60.</p><p>You can use the command:</p><pre class="screen">
computeBugHistory jdk1.6.0-b* | filterBugs -bugPattern IL_ | mineBugHistory -formatDates
</pre><p>to generate the following output:</p><pre class="screen">
@@ -301,11 +301,11 @@ seq version time classes NCSS added newCode fixed removed retained dead active
42 jdk1.6.0-b59 "Thu Nov 03 01:56:58 EST 2005" 16232 972193 6 0 5 0 1392 280 1398
43 jdk1.6.0-b60 "Thu Nov 10 01:54:18 EST 2005" 16235 972346 0 0 0 0 1398 285 1398
44 jdk1.6.0-b61 "Thu Nov 17 01:58:42 EST 2005" 16202 971134 2 0 4 0 1394 285 1396
-</pre></div><div class="sect2" title="2.2.&nbsp;Incremental history maintenance"><div class="titlepage"><div><div><h3 class="title"><a name="incrementalhistory"></a>2.2.&nbsp;Incremental history maintenance</h3></div></div></div><p>
+</pre></div><div class="sect2"><div class="titlepage"><div><div><h3 class="title"><a name="incrementalhistory"></a>2.2.&nbsp;Incremental history maintenance</h3></div></div></div><p>
If db.xml contains the results of running findbugs over builds b12 - b60, we can update db.xml to include the results of analyzing b61 with the commands:
</p><pre class="screen">
computeBugHistory -output db.xml db.xml jdk1.6.0-b61/jre/lib/rt.xml
-</pre></div></div><div class="sect1" title="3.&nbsp;Ant example"><div class="titlepage"><div><div><h2 class="title" style="clear: both"><a name="antexample"></a>3.&nbsp;Ant example</h2></div></div></div><p>
+</pre></div></div><div class="sect1"><div class="titlepage"><div><div><h2 class="title" style="clear: both"><a name="antexample"></a>3.&nbsp;Ant example</h2></div></div></div><p>
Here is a complete ant script example for both running findbugs and running a chain of data-mining tools afterward:
</p><pre class="screen">
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